Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.04□□□□□ -0.48
Thbs3Q05895 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.03□□□□□ -0.48
Thbs3Q05895 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Gm15770-201ENSMUST00000117498 584 ntBASIC12.03□□□□□ -0.48
Thbs3Q05895 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.03□□□□□ -0.48
Thbs3Q05895 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.03□□□□□ -0.48
Thbs3Q05895 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs3Q05895 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs3Q05895 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs3Q05895 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Thbs3Q05895 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Gm16215-201ENSMUST00000161990 637 ntBASIC12.02□□□□□ -0.49
Thbs3Q05895 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Gm28760-201ENSMUST00000185995 736 ntBASIC12.02□□□□□ -0.49
Thbs3Q05895 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Thbs3Q05895 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs3Q05895 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.01□□□□□ -0.49
Thbs3Q05895 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm22189-201ENSMUST00000103822 86 ntBASIC12.01□□□□□ -0.49
Thbs3Q05895 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Thbs3Q05895 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.01□□□□□ -0.49
Thbs3Q05895 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thbs3Q05895 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thbs3Q05895 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms