Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC9.88□□□□□ -0.83
Notch1Q01705 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Notch1Q01705 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.88□□□□□ -0.83
Notch1Q01705 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.88□□□□□ -0.83
Notch1Q01705 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Notch1Q01705 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.88□□□□□ -0.83
Notch1Q01705 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.88□□□□□ -0.83
Notch1Q01705 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Notch1Q01705 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.88□□□□□ -0.83
Notch1Q01705 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Notch1Q01705 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Notch1Q01705 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Notch1Q01705 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Notch1Q01705 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC9.87□□□□□ -0.83
Notch1Q01705 Gm11439-201ENSMUST00000118598 409 ntBASIC9.87□□□□□ -0.83
Notch1Q01705 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Notch1Q01705 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.87□□□□□ -0.83
Notch1Q01705 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.87□□□□□ -0.83
Notch1Q01705 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Notch1Q01705 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Notch1Q01705 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Gm15370-201ENSMUST00000117158 253 ntBASIC9.87□□□□□ -0.83
Notch1Q01705 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Gm2260-201ENSMUST00000184965 657 ntBASIC9.87□□□□□ -0.83
Notch1Q01705 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Notch1Q01705 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Notch1Q01705 Gm14451-201ENSMUST00000121581 1542 ntBASIC9.87□□□□□ -0.83
Notch1Q01705 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Notch1Q01705 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Notch1Q01705 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Notch1Q01705 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Notch1Q01705 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC9.86□□□□□ -0.83
Notch1Q01705 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Notch1Q01705 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms