Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.33□□□□□ -0.44
Shc1P98083 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shc1P98083 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Shc1P98083 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Shc1P98083 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.32□□□□□ -0.44
Shc1P98083 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.32□□□□□ -0.44
Shc1P98083 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.32□□□□□ -0.44
Shc1P98083 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.32□□□□□ -0.44
Shc1P98083 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Shc1P98083 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Shc1P98083 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Shc1P98083 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.32□□□□□ -0.44
Shc1P98083 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shc1P98083 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Shc1P98083 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shc1P98083 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.31□□□□□ -0.44
Shc1P98083 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Shc1P98083 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Gm24420-201ENSMUST00000176676 59 ntBASIC12.31□□□□□ -0.44
Shc1P98083 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.31□□□□□ -0.44
Shc1P98083 Gm5279-201ENSMUST00000199575 745 ntBASIC12.31□□□□□ -0.44
Shc1P98083 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.31□□□□□ -0.44
Shc1P98083 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.31□□□□□ -0.44
Shc1P98083 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shc1P98083 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Shc1P98083 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.31□□□□□ -0.44
Shc1P98083 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.31□□□□□ -0.44
Shc1P98083 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.31□□□□□ -0.44
Shc1P98083 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.31□□□□□ -0.44
Shc1P98083 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shc1P98083 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Shc1P98083 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shc1P98083 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.3□□□□□ -0.44
Shc1P98083 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shc1P98083 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Shc1P98083 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shc1P98083 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shc1P98083 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shc1P98083 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shc1P98083 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms