Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm13786-201ENSMUST00000122371 333 ntBASIC12.62□□□□□ -0.39
Cacna1aP97445 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cacna1aP97445 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.62□□□□□ -0.39
Cacna1aP97445 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.61□□□□□ -0.39
Cacna1aP97445 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.61□□□□□ -0.39
Cacna1aP97445 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.61□□□□□ -0.39
Cacna1aP97445 Gm9368-201ENSMUST00000219348 831 ntBASIC12.61□□□□□ -0.39
Cacna1aP97445 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.61□□□□□ -0.39
Cacna1aP97445 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.61□□□□□ -0.39
Cacna1aP97445 Gm22323-201ENSMUST00000103832 109 ntBASIC12.61□□□□□ -0.39
Cacna1aP97445 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cacna1aP97445 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms