Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.19□□□□□ -0.46
H3f3aP84244 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.19□□□□□ -0.46
H3f3aP84244 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm5354-201ENSMUST00000182417 973 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.19□□□□□ -0.46
H3f3aP84244 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H3f3aP84244 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3aP84244 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H3f3aP84244 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.18□□□□□ -0.46
H3f3aP84244 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H3f3aP84244 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Gm5866-201ENSMUST00000177881 973 ntBASIC12.18□□□□□ -0.46
H3f3aP84244 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
H3f3aP84244 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
H3f3aP84244 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
H3f3aP84244 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.18□□□□□ -0.46
H3f3aP84244 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
H3f3aP84244 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H3f3aP84244 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
H3f3aP84244 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H3f3aP84244 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
H3f3aP84244 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.17□□□□□ -0.46
H3f3aP84244 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms