Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Atf1P81269 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atf1P81269 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atf1P81269 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atf1P81269 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atf1P81269 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atf1P81269 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atf1P81269 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Atf1P81269 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.86□□□□□ -0.51
Atf1P81269 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Atf1P81269 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Atf1P81269 Gm15393-201ENSMUST00000120499 219 ntBASIC11.86□□□□□ -0.51
Atf1P81269 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 Gm4804-201ENSMUST00000182234 999 ntBASIC11.86□□□□□ -0.51
Atf1P81269 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.86□□□□□ -0.51
Atf1P81269 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.86□□□□□ -0.51
Atf1P81269 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atf1P81269 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.86□□□□□ -0.51
Atf1P81269 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Atf1P81269 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.86□□□□□ -0.51
Atf1P81269 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Atf1P81269 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Atf1P81269 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Gm23935-201ENSMUST00000102303 57 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Gm24270-201ENSMUST00000102326 57 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Gm24245-201ENSMUST00000157318 57 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Gm25948-201ENSMUST00000175334 112 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.85□□□□□ -0.51
Atf1P81269 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Gm43575-201ENSMUST00000196420 516 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atf1P81269 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.85□□□□□ -0.51
Atf1P81269 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atf1P81269 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf1P81269 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms