Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Lsm5P62322 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm5P62322 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.39□□□□□ -0.59
Lsm5P62322 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm5P62322 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lsm5P62322 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm5P62322 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.39□□□□□ -0.59
Lsm5P62322 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm5P62322 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm5P62322 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.39□□□□□ -0.59
Lsm5P62322 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm5P62322 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.38□□□□□ -0.59
Lsm5P62322 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm5P62322 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.38□□□□□ -0.59
Lsm5P62322 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
Lsm5P62322 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm5P62322 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm14859-201ENSMUST00000117752 357 ntBASIC11.38□□□□□ -0.59
Lsm5P62322 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Lsm5P62322 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm5P62322 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.38□□□□□ -0.59
Lsm5P62322 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm5P62322 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm5P62322 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.38□□□□□ -0.59
Lsm5P62322 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm5P62322 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.38□□□□□ -0.59
Lsm5P62322 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm5P62322 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lsm5P62322 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.37□□□□□ -0.59
Lsm5P62322 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lsm5P62322 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.37□□□□□ -0.59
Lsm5P62322 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.37□□□□□ -0.59
Lsm5P62322 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.37□□□□□ -0.59
Lsm5P62322 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm5P62322 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Lsm5P62322 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.37□□□□□ -0.59
Lsm5P62322 Gm17807-201ENSMUST00000186869 298 ntBASIC11.37□□□□□ -0.59
Lsm5P62322 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.37□□□□□ -0.59
Lsm5P62322 Gm33142-201ENSMUST00000193913 867 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms