Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Gm12895-201ENSMUST00000122214 226 ntBASIC12.44□□□□□ -0.42
Lsm3P62311 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm3P62311 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm3P62311 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Gm45167-201ENSMUST00000208007 322 ntBASIC12.44□□□□□ -0.42
Lsm3P62311 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Lsm3P62311 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lsm3P62311 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.44□□□□□ -0.42
Lsm3P62311 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.44□□□□□ -0.42
Lsm3P62311 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.44□□□□□ -0.42
Lsm3P62311 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Lsm3P62311 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lsm3P62311 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm3P62311 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.43□□□□□ -0.42
Lsm3P62311 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Gm2445-201ENSMUST00000182798 989 ntBASIC12.43□□□□□ -0.42
Lsm3P62311 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.43□□□□□ -0.42
Lsm3P62311 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.43□□□□□ -0.42
Lsm3P62311 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm3P62311 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm3P62311 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.43□□□□□ -0.42
Lsm3P62311 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.43□□□□□ -0.42
Lsm3P62311 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm3P62311 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms