Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14□□□□□ -0.17
Tubgcp3P58854 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14□□□□□ -0.17
Tubgcp3P58854 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Tubgcp3P58854 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
Tubgcp3P58854 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tubgcp3P58854 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14□□□□□ -0.17
Tubgcp3P58854 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Tubgcp3P58854 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tubgcp3P58854 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tubgcp3P58854 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tubgcp3P58854 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gm12585-201ENSMUST00000117307 290 ntBASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.99□□□□□ -0.17
Tubgcp3P58854 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gm8927-201ENSMUST00000181978 981 ntBASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.99□□□□□ -0.17
Tubgcp3P58854 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.99□□□□□ -0.17
Tubgcp3P58854 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gm3222-201ENSMUST00000071282 990 ntBASIC13.99□□□□□ -0.17
Tubgcp3P58854 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tubgcp3P58854 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gm4804-201ENSMUST00000182234 999 ntBASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gm10766-202ENSMUST00000194123 606 ntBASIC13.98□□□□□ -0.17
Tubgcp3P58854 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gm9063-201ENSMUST00000223299 582 ntBASIC13.98□□□□□ -0.17
Tubgcp3P58854 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.98□□□□□ -0.17
Tubgcp3P58854 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubgcp3P58854 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tubgcp3P58854 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms