Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tpm1P58771 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tpm1P58771 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tpm1P58771 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Tpm1P58771 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.25■□□□□ 0.03
Tpm1P58771 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.25■□□□□ 0.03
Tpm1P58771 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.25■□□□□ 0.03
Tpm1P58771 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Gm17968-201ENSMUST00000194902 784 ntBASIC15.25■□□□□ 0.03
Tpm1P58771 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.25■□□□□ 0.03
Tpm1P58771 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tpm1P58771 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tpm1P58771 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.25■□□□□ 0.03
Tpm1P58771 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tpm1P58771 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tpm1P58771 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm1P58771 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tpm1P58771 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tpm1P58771 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Tpm1P58771 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tpm1P58771 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tpm1P58771 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.24■□□□□ 0.03
Tpm1P58771 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.24■□□□□ 0.03
Tpm1P58771 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.24■□□□□ 0.03
Tpm1P58771 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tpm1P58771 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tpm1P58771 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Tpm1P58771 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tpm1P58771 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm1P58771 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.23■□□□□ 0.03
Tpm1P58771 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Tpm1P58771 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tpm1P58771 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tpm1P58771 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms