Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.07□□□□□ -0.64
Sssca1P56873 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.07□□□□□ -0.64
Sssca1P56873 Gm6222-201ENSMUST00000120787 396 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.07□□□□□ -0.64
Sssca1P56873 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Sssca1P56873 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.07□□□□□ -0.64
Sssca1P56873 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.07□□□□□ -0.64
Sssca1P56873 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.07□□□□□ -0.64
Sssca1P56873 Gm18057-201ENSMUST00000208220 503 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 Mzt1-203ENSMUST00000227948 952 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 BC001981-202ENSMUST00000191393 1545 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sssca1P56873 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.07□□□□□ -0.64
Sssca1P56873 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sssca1P56873 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.06□□□□□ -0.64
Sssca1P56873 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.06□□□□□ -0.64
Sssca1P56873 Mir3113-201ENSMUST00000175478 76 ntBASIC11.06□□□□□ -0.64
Sssca1P56873 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Gm18027-201ENSMUST00000218947 619 ntBASIC11.06□□□□□ -0.64
Sssca1P56873 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.06□□□□□ -0.64
Sssca1P56873 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.06□□□□□ -0.64
Sssca1P56873 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Sssca1P56873 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sssca1P56873 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.06□□□□□ -0.64
Sssca1P56873 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sssca1P56873 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sssca1P56873 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sssca1P56873 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sssca1P56873 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.05□□□□□ -0.64
Sssca1P56873 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.05□□□□□ -0.64
Sssca1P56873 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.05□□□□□ -0.64
Sssca1P56873 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.05□□□□□ -0.64
Sssca1P56873 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.05□□□□□ -0.64
Sssca1P56873 Gm5364-201ENSMUST00000216789 889 ntBASIC11.05□□□□□ -0.64
Sssca1P56873 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sssca1P56873 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sssca1P56873 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sssca1P56873 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sssca1P56873 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sssca1P56873 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms