Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Lim2P56563 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Mir698-201ENSMUST00000102164 109 ntBASIC13.7□□□□□ -0.22
Lim2P56563 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lim2P56563 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lim2P56563 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Lim2P56563 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lim2P56563 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.7□□□□□ -0.22
Lim2P56563 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Gm24420-201ENSMUST00000176676 59 ntBASIC13.7□□□□□ -0.22
Lim2P56563 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lim2P56563 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Lim2P56563 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.7□□□□□ -0.22
Lim2P56563 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.7□□□□□ -0.22
Lim2P56563 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.7□□□□□ -0.22
Lim2P56563 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.7□□□□□ -0.22
Lim2P56563 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lim2P56563 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lim2P56563 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.7□□□□□ -0.22
Lim2P56563 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.69□□□□□ -0.22
Lim2P56563 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Gm28631-201ENSMUST00000190740 334 ntBASIC13.69□□□□□ -0.22
Lim2P56563 Gm5279-201ENSMUST00000199575 745 ntBASIC13.69□□□□□ -0.22
Lim2P56563 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.69□□□□□ -0.22
Lim2P56563 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lim2P56563 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.69□□□□□ -0.22
Lim2P56563 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lim2P56563 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lim2P56563 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.68□□□□□ -0.22
Lim2P56563 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.68□□□□□ -0.22
Lim2P56563 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.68□□□□□ -0.22
Lim2P56563 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.68□□□□□ -0.22
Lim2P56563 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.68□□□□□ -0.22
Lim2P56563 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.68□□□□□ -0.22
Lim2P56563 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.68□□□□□ -0.22
Lim2P56563 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lim2P56563 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lim2P56563 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lim2P56563 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.67□□□□□ -0.22
Lim2P56563 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lim2P56563 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms