Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rab4aP56371 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rab4aP56371 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rab4aP56371 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rab4aP56371 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rab4aP56371 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Rab4aP56371 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rab4aP56371 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.78□□□□□ -0.68
Rab4aP56371 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.78□□□□□ -0.68
Rab4aP56371 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Rab4aP56371 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Rab4aP56371 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rab4aP56371 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Rab4aP56371 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Rab4aP56371 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Rab4aP56371 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rab4aP56371 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.77□□□□□ -0.69
Rab4aP56371 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.77□□□□□ -0.69
Rab4aP56371 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Gm11950-201ENSMUST00000121615 838 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 Gm10499-201ENSMUST00000174094 934 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.77□□□□□ -0.69
Rab4aP56371 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 Gm5587-201ENSMUST00000206270 674 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rab4aP56371 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.77□□□□□ -0.69
Rab4aP56371 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.77□□□□□ -0.69
Rab4aP56371 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.77□□□□□ -0.69
Rab4aP56371 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rab4aP56371 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Rab4aP56371 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rab4aP56371 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms