Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdh5P55284 Gm6888-201ENSMUST00000221983 706 ntBASIC13.38□□□□□ -0.27
Cdh5P55284 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdh5P55284 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh5P55284 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh5P55284 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdh5P55284 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdh5P55284 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh5P55284 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh5P55284 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Gm13823-201ENSMUST00000119930 345 ntBASIC13.37□□□□□ -0.27
Cdh5P55284 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdh5P55284 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cdh5P55284 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Cdh5P55284 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdh5P55284 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh5P55284 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.36□□□□□ -0.27
Cdh5P55284 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh5P55284 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh5P55284 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Gm9182-201ENSMUST00000217829 639 ntBASIC13.36□□□□□ -0.27
Cdh5P55284 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.36□□□□□ -0.27
Cdh5P55284 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh5P55284 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh5P55284 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.35□□□□□ -0.27
Cdh5P55284 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh5P55284 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh5P55284 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdh5P55284 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh5P55284 Gm28630-201ENSMUST00000187806 498 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms