Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox3P53784 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox3P53784 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox3P53784 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Mir1894-201ENSMUST00000122802 81 ntBASIC13.14□□□□□ -0.31
Sox3P53784 Gm27839-201ENSMUST00000184242 106 ntBASIC13.14□□□□□ -0.31
Sox3P53784 Mir7654-201ENSMUST00000185082 70 ntBASIC13.14□□□□□ -0.31
Sox3P53784 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.14□□□□□ -0.31
Sox3P53784 Gm45453-201ENSMUST00000211758 853 ntBASIC13.14□□□□□ -0.31
Sox3P53784 Gm17794-201ENSMUST00000220252 955 ntBASIC13.14□□□□□ -0.31
Sox3P53784 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox3P53784 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox3P53784 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Sox3P53784 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox3P53784 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox3P53784 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.13□□□□□ -0.31
Sox3P53784 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sox3P53784 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.13□□□□□ -0.31
Sox3P53784 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.13□□□□□ -0.31
Sox3P53784 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.13□□□□□ -0.31
Sox3P53784 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.13□□□□□ -0.31
Sox3P53784 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Sox3P53784 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox3P53784 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox3P53784 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox3P53784 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox3P53784 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.13□□□□□ -0.31
Sox3P53784 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.13□□□□□ -0.31
Sox3P53784 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox3P53784 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
Sox3P53784 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Gm14660-201ENSMUST00000119809 575 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox3P53784 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 AA619741-201ENSMUST00000195095 646 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox3P53784 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms