Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.4□□□□□ -0.42
Rfx3P48381 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Gm9719-201ENSMUST00000162765 543 ntBASIC12.4□□□□□ -0.42
Rfx3P48381 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfx3P48381 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Gm10253-201ENSMUST00000194270 940 ntBASIC12.4□□□□□ -0.42
Rfx3P48381 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.4□□□□□ -0.42
Rfx3P48381 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfx3P48381 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rfx3P48381 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.4□□□□□ -0.42
Rfx3P48381 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx3P48381 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx3P48381 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Rfx3P48381 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.4□□□□□ -0.43
Rfx3P48381 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx3P48381 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx3P48381 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rfx3P48381 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Rfx3P48381 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
Rfx3P48381 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Rfx3P48381 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rfx3P48381 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.39□□□□□ -0.43
Rfx3P48381 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.39□□□□□ -0.43
Rfx3P48381 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rfx3P48381 Mir125a-201ENSMUST00000083545 68 ntBASIC12.39□□□□□ -0.43
Rfx3P48381 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.39□□□□□ -0.43
Rfx3P48381 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rfx3P48381 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx3P48381 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rfx3P48381 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rfx3P48381 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rfx3P48381 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rfx3P48381 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.38□□□□□ -0.43
Rfx3P48381 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.38□□□□□ -0.43
Rfx3P48381 Gm29541-201ENSMUST00000191351 678 ntBASIC12.38□□□□□ -0.43
Rfx3P48381 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Gm7774-201ENSMUST00000200064 533 ntBASIC12.38□□□□□ -0.43
Rfx3P48381 Gm5312-201ENSMUST00000203728 547 ntBASIC12.38□□□□□ -0.43
Rfx3P48381 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.38□□□□□ -0.43
Rfx3P48381 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.38□□□□□ -0.43
Rfx3P48381 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.38□□□□□ -0.43
Rfx3P48381 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms