Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nkx2-2P42586 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.56□□□□□ -0.4
Nkx2-2P42586 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Nkx2-2P42586 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.56□□□□□ -0.4
Nkx2-2P42586 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-2P42586 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Gm16215-201ENSMUST00000161990 637 ntBASIC12.55□□□□□ -0.4
Nkx2-2P42586 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.55□□□□□ -0.4
Nkx2-2P42586 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.55□□□□□ -0.4
Nkx2-2P42586 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.55□□□□□ -0.4
Nkx2-2P42586 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-2P42586 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.54□□□□□ -0.4
Nkx2-2P42586 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm43094-201ENSMUST00000196549 921 ntBASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm42612-201ENSMUST00000197986 623 ntBASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm43170-201ENSMUST00000199827 612 ntBASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gm17330-201ENSMUST00000221047 165 ntBASIC12.54□□□□□ -0.4
Nkx2-2P42586 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-2P42586 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms