Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
Abca1P41233 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Gm23931-201ENSMUST00000103842 109 ntBASIC11.4□□□□□ -0.58
Abca1P41233 Gm14723-201ENSMUST00000118686 215 ntBASIC11.4□□□□□ -0.58
Abca1P41233 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.4□□□□□ -0.58
Abca1P41233 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Abca1P41233 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Abca1P41233 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.4□□□□□ -0.59
Abca1P41233 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Abca1P41233 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Abca1P41233 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Abca1P41233 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.4□□□□□ -0.59
Abca1P41233 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Abca1P41233 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Abca1P41233 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Abca1P41233 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.39□□□□□ -0.59
Abca1P41233 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.39□□□□□ -0.59
Abca1P41233 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Abca1P41233 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.39□□□□□ -0.59
Abca1P41233 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Abca1P41233 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.39□□□□□ -0.59
Abca1P41233 Gm27847-201ENSMUST00000183711 107 ntBASIC11.39□□□□□ -0.59
Abca1P41233 Gm27375-201ENSMUST00000183799 107 ntBASIC11.39□□□□□ -0.59
Abca1P41233 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Abca1P41233 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca1P41233 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Abca1P41233 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Abca1P41233 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Gm7287-201ENSMUST00000205267 602 ntBASIC11.38□□□□□ -0.59
Abca1P41233 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.38□□□□□ -0.59
Abca1P41233 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Abca1P41233 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Abca1P41233 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms