Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Sox6P40645 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox6P40645 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.88□□□□□ -0.35
Sox6P40645 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.88□□□□□ -0.35
Sox6P40645 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.88□□□□□ -0.35
Sox6P40645 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox6P40645 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox6P40645 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.88□□□□□ -0.35
Sox6P40645 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox6P40645 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.87□□□□□ -0.35
Sox6P40645 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Sox6P40645 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox6P40645 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox6P40645 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Gm8584-201ENSMUST00000171982 758 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Gm27430-201ENSMUST00000184585 107 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Gm44333-201ENSMUST00000197168 107 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox6P40645 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.87□□□□□ -0.35
Sox6P40645 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox6P40645 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Sox6P40645 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Gm13015-201ENSMUST00000118674 204 ntBASIC12.86□□□□□ -0.35
Sox6P40645 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox6P40645 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Sox6P40645 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.86□□□□□ -0.35
Sox6P40645 Gm10275-202ENSMUST00000168697 495 ntBASIC12.86□□□□□ -0.35
Sox6P40645 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox6P40645 Gm5779-201ENSMUST00000218467 910 ntBASIC12.86□□□□□ -0.35
Sox6P40645 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Gm10275-201ENSMUST00000092620 635 ntBASIC12.86□□□□□ -0.35
Sox6P40645 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sox6P40645 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox6P40645 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox6P40645 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox6P40645 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms