Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cd9P40240 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cd9P40240 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cd9P40240 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.49□□□□□ -0.25
Cd9P40240 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm11524-201ENSMUST00000119349 807 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm12403-201ENSMUST00000121384 959 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cd9P40240 Gm38144-201ENSMUST00000192790 465 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.49□□□□□ -0.25
Cd9P40240 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.49□□□□□ -0.25
Cd9P40240 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cd9P40240 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.49□□□□□ -0.25
Cd9P40240 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cd9P40240 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cd9P40240 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.49□□□□□ -0.25
Cd9P40240 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.48□□□□□ -0.25
Cd9P40240 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.48□□□□□ -0.25
Cd9P40240 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.48□□□□□ -0.25
Cd9P40240 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.48□□□□□ -0.25
Cd9P40240 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.48□□□□□ -0.25
Cd9P40240 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.48□□□□□ -0.25
Cd9P40240 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.48□□□□□ -0.25
Cd9P40240 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.48□□□□□ -0.25
Cd9P40240 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd9P40240 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cd9P40240 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cd9P40240 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd9P40240 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms