Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm14150-201ENSMUST00000122404 1354 ntBASIC20.1■□□□□ 0.81
Chd1P40201 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC20.09■□□□□ 0.81
Chd1P40201 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chd1P40201 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.09■□□□□ 0.81
Chd1P40201 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC20.09■□□□□ 0.81
Chd1P40201 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd1P40201 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC20.09■□□□□ 0.81
Chd1P40201 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC20.08■□□□□ 0.81
Chd1P40201 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 Gm11340-201ENSMUST00000119226 412 ntBASIC20.08■□□□□ 0.81
Chd1P40201 Gm8492-201ENSMUST00000182375 987 ntBASIC20.08■□□□□ 0.81
Chd1P40201 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC20.08■□□□□ 0.81
Chd1P40201 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC20.08■□□□□ 0.81
Chd1P40201 AC159103.1-201ENSMUST00000228325 429 ntBASIC20.08■□□□□ 0.81
Chd1P40201 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Chd1P40201 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chd1P40201 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Chd1P40201 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chd1P40201 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.08■□□□□ 0.8
Chd1P40201 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd1P40201 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd1P40201 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chd1P40201 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd1P40201 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.08■□□□□ 0.8
Chd1P40201 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.07■□□□□ 0.8
Chd1P40201 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Chd1P40201 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Chd1P40201 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC20.07■□□□□ 0.8
Chd1P40201 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.07■□□□□ 0.8
Chd1P40201 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Gm23949-201ENSMUST00000104027 127 ntBASIC20.07■□□□□ 0.8
Chd1P40201 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC20.07■□□□□ 0.8
Chd1P40201 Gm14460-201ENSMUST00000121511 639 ntBASIC20.07■□□□□ 0.8
Chd1P40201 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC20.07■□□□□ 0.8
Chd1P40201 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC20.07■□□□□ 0.8
Chd1P40201 Gm5732-201ENSMUST00000182596 1007 ntBASIC20.07■□□□□ 0.8
Chd1P40201 Gm9061-201ENSMUST00000182707 1006 ntBASIC20.07■□□□□ 0.8
Chd1P40201 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC20.07■□□□□ 0.8
Chd1P40201 AC163667.3-201ENSMUST00000225774 222 ntBASIC20.07■□□□□ 0.8
Chd1P40201 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd1P40201 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC20.06■□□□□ 0.8
Chd1P40201 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chd1P40201 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC20.06■□□□□ 0.8
Chd1P40201 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Chd1P40201 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Chd1P40201 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Gm12015-201ENSMUST00000117065 843 ntBASIC20.06■□□□□ 0.8
Chd1P40201 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC20.06■□□□□ 0.8
Chd1P40201 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Chd1P40201 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chd1P40201 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Chd1P40201 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Chd1P40201 Gm19994-201ENSMUST00000217086 586 ntBASIC20.06■□□□□ 0.8
Chd1P40201 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms