Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
RetP35546 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.85□□□□□ -0.35
RetP35546 Gm9002-201ENSMUST00000178437 499 ntBASIC12.85□□□□□ -0.35
RetP35546 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.85□□□□□ -0.35
RetP35546 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RetP35546 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.85□□□□□ -0.35
RetP35546 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.85□□□□□ -0.35
RetP35546 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.85□□□□□ -0.35
RetP35546 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
RetP35546 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RetP35546 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.84□□□□□ -0.35
RetP35546 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RetP35546 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RetP35546 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.84□□□□□ -0.35
RetP35546 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RetP35546 Gm21854-201ENSMUST00000179901 471 ntBASIC12.84□□□□□ -0.35
RetP35546 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RetP35546 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RetP35546 AA619741-201ENSMUST00000195095 646 ntBASIC12.84□□□□□ -0.35
RetP35546 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Gm43630-201ENSMUST00000201550 776 ntBASIC12.84□□□□□ -0.35
RetP35546 Gm6007-201ENSMUST00000208170 823 ntBASIC12.84□□□□□ -0.35
RetP35546 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.84□□□□□ -0.35
RetP35546 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.84□□□□□ -0.35
RetP35546 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RetP35546 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RetP35546 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RetP35546 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RetP35546 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RetP35546 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RetP35546 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
RetP35546 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.83□□□□□ -0.36
RetP35546 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.83□□□□□ -0.36
RetP35546 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Gm2445-201ENSMUST00000182798 989 ntBASIC12.83□□□□□ -0.36
RetP35546 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.83□□□□□ -0.36
RetP35546 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.83□□□□□ -0.36
RetP35546 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Mir125a-201ENSMUST00000083545 68 ntBASIC12.83□□□□□ -0.36
RetP35546 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RetP35546 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RetP35546 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms