Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Gm5866-201ENSMUST00000177881 973 ntBASIC12.66□□□□□ -0.38
Cd40lgP27548 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Gm5425-201ENSMUST00000214125 459 ntBASIC12.66□□□□□ -0.38
Cd40lgP27548 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.66□□□□□ -0.38
Cd40lgP27548 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Gm20445-201ENSMUST00000061905 565 ntBASIC12.66□□□□□ -0.38
Cd40lgP27548 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.66□□□□□ -0.38
Cd40lgP27548 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Cd40lgP27548 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40lgP27548 Acot6-202ENSMUST00000222921 3622 ntBASIC12.66□□□□□ -0.38
Cd40lgP27548 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Gm4875-201ENSMUST00000118257 786 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.65□□□□□ -0.38
Cd40lgP27548 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd40lgP27548 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40lgP27548 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd40lgP27548 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms