Protein–RNA interactions for Protein: P24788

Cdk11b, Cyclin-dependent kinase 11B, mousemouse

Known RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk11bP24788 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk11bP24788 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk11bP24788 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk11bP24788 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Cdk11bP24788 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.8■□□□□ 0.92
Cdk11bP24788 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 CT030704.2-201ENSMUST00000228887 494 ntBASIC20.8■□□□□ 0.92
Cdk11bP24788 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Gm5161-201ENSMUST00000075243 853 ntBASIC20.8■□□□□ 0.92
Cdk11bP24788 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Gm24447-201ENSMUST00000083977 338 ntBASIC20.8■□□□□ 0.92
Cdk11bP24788 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
Cdk11bP24788 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk11bP24788 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cdk11bP24788 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cdk11bP24788 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC20.79■□□□□ 0.92
Cdk11bP24788 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.79■□□□□ 0.92
Cdk11bP24788 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC20.79■□□□□ 0.92
Cdk11bP24788 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cdk11bP24788 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk11bP24788 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.78■□□□□ 0.92
Cdk11bP24788 Gm38671-201ENSMUST00000200573 130 ntBASIC20.78■□□□□ 0.92
Cdk11bP24788 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Gm18473-201ENSMUST00000220543 868 ntBASIC20.78■□□□□ 0.92
Cdk11bP24788 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cdk11bP24788 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Matn2-206ENSMUST00000228570 2798 ntBASIC20.78■□□□□ 0.92
Cdk11bP24788 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk11bP24788 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cdk11bP24788 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cdk11bP24788 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Cdk11bP24788 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC20.77■□□□□ 0.92
Cdk11bP24788 Gm37424-201ENSMUST00000191727 561 ntBASIC20.77■□□□□ 0.92
Cdk11bP24788 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.77■□□□□ 0.92
Cdk11bP24788 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC20.77■□□□□ 0.92
Cdk11bP24788 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk11bP24788 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC20.77■□□□□ 0.92
Cdk11bP24788 Gm9347-201ENSMUST00000211473 1607 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms