Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.2□□□□□ -0.46
P20040 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P20040 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P20040 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
P20040 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
P20040 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
P20040 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P20040 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
P20040 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P20040 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.19□□□□□ -0.46
P20040 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.19□□□□□ -0.46
P20040 Gm5566-201ENSMUST00000116118 459 ntBASIC12.19□□□□□ -0.46
P20040 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.19□□□□□ -0.46
P20040 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Mir7023-201ENSMUST00000185093 64 ntBASIC12.19□□□□□ -0.46
P20040 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.19□□□□□ -0.46
P20040 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.19□□□□□ -0.46
P20040 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
P20040 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.19□□□□□ -0.46
P20040 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.19□□□□□ -0.46
P20040 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.19□□□□□ -0.46
P20040 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.19□□□□□ -0.46
P20040 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
P20040 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
P20040 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P20040 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P20040 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.19□□□□□ -0.46
P20040 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P20040 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P20040 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P20040 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.18□□□□□ -0.46
P20040 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P20040 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.18□□□□□ -0.46
P20040 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
P20040 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.18□□□□□ -0.46
P20040 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.18□□□□□ -0.46
P20040 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Gm17837-201ENSMUST00000186435 985 ntBASIC12.18□□□□□ -0.46
P20040 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.18□□□□□ -0.46
P20040 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
P20040 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P20040 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.18□□□□□ -0.46
P20040 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
P20040 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P20040 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P20040 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.17□□□□□ -0.46
P20040 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
P20040 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms