Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.05□□□□□ -0.32
Msx1P13297 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Msx1P13297 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Gm12957-201ENSMUST00000117835 377 ntBASIC13.05□□□□□ -0.32
Msx1P13297 Gm12341-201ENSMUST00000119724 503 ntBASIC13.05□□□□□ -0.32
Msx1P13297 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Gm28975-201ENSMUST00000186412 686 ntBASIC13.05□□□□□ -0.32
Msx1P13297 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Msx1P13297 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Msx1P13297 Gm33320-201ENSMUST00000192232 530 ntBASIC13.05□□□□□ -0.32
Msx1P13297 Gm6916-202ENSMUST00000205523 195 ntBASIC13.05□□□□□ -0.32
Msx1P13297 Gm45331-201ENSMUST00000209868 554 ntBASIC13.05□□□□□ -0.32
Msx1P13297 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.05□□□□□ -0.32
Msx1P13297 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Gm5356-201ENSMUST00000093326 615 ntBASIC13.05□□□□□ -0.32
Msx1P13297 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Msx1P13297 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msx1P13297 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.04□□□□□ -0.32
Msx1P13297 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.04□□□□□ -0.32
Msx1P13297 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Msx1P13297 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.04□□□□□ -0.32
Msx1P13297 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.04□□□□□ -0.32
Msx1P13297 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Msx1P13297 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.04□□□□□ -0.32
Msx1P13297 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.04□□□□□ -0.32
Msx1P13297 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Msx1P13297 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Msx1P13297 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Msx1P13297 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.04□□□□□ -0.32
Msx1P13297 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msx1P13297 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Msx1P13297 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Msx1P13297 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Msx1P13297 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Msx1P13297 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msx1P13297 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Msx1P13297 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 Gm15678-201ENSMUST00000117573 960 ntBASIC13.03□□□□□ -0.32
Msx1P13297 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.03□□□□□ -0.32
Msx1P13297 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msx1P13297 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms