Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.13□□□□□ -0.31
Cntn1P12960 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cntn1P12960 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Gm12485-201ENSMUST00000119641 291 ntBASIC13.13□□□□□ -0.31
Cntn1P12960 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Gm26464-201ENSMUST00000157094 305 ntBASIC13.13□□□□□ -0.31
Cntn1P12960 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
Cntn1P12960 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.13□□□□□ -0.31
Cntn1P12960 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.13□□□□□ -0.31
Cntn1P12960 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.13□□□□□ -0.31
Cntn1P12960 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cntn1P12960 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cntn1P12960 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Cntn1P12960 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.12□□□□□ -0.31
Cntn1P12960 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.12□□□□□ -0.31
Cntn1P12960 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Gm2445-201ENSMUST00000182798 989 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.12□□□□□ -0.31
Cntn1P12960 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cntn1P12960 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cntn1P12960 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cntn1P12960 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.12□□□□□ -0.31
Cntn1P12960 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms