Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxb3P09026 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.63□□□□□ -0.23
Hoxb3P09026 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.63□□□□□ -0.23
Hoxb3P09026 Gm8194-201ENSMUST00000159783 859 ntBASIC13.63□□□□□ -0.23
Hoxb3P09026 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hoxb3P09026 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.63□□□□□ -0.23
Hoxb3P09026 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.63□□□□□ -0.23
Hoxb3P09026 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.63□□□□□ -0.23
Hoxb3P09026 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hoxb3P09026 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.63□□□□□ -0.23
Hoxb3P09026 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxb3P09026 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Gm22018-201ENSMUST00000104357 131 ntBASIC13.62□□□□□ -0.23
Hoxb3P09026 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Gm24420-201ENSMUST00000176676 59 ntBASIC13.62□□□□□ -0.23
Hoxb3P09026 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Gm43818-201ENSMUST00000200605 466 ntBASIC13.62□□□□□ -0.23
Hoxb3P09026 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.62□□□□□ -0.23
Hoxb3P09026 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.62□□□□□ -0.23
Hoxb3P09026 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxb3P09026 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxb3P09026 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Gm4909-201ENSMUST00000118749 794 ntBASIC13.61□□□□□ -0.23
Hoxb3P09026 Gm11524-201ENSMUST00000119349 807 ntBASIC13.61□□□□□ -0.23
Hoxb3P09026 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.61□□□□□ -0.23
Hoxb3P09026 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxb3P09026 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxb3P09026 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms