Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.96□□□□□ -0.33
ApoeP08226 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.96□□□□□ -0.33
ApoeP08226 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ApoeP08226 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.96□□□□□ -0.33
ApoeP08226 Gm17971-201ENSMUST00000190239 806 ntBASIC12.96□□□□□ -0.33
ApoeP08226 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.96□□□□□ -0.33
ApoeP08226 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.96□□□□□ -0.33
ApoeP08226 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.96□□□□□ -0.33
ApoeP08226 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.96□□□□□ -0.33
ApoeP08226 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
ApoeP08226 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.96□□□□□ -0.34
ApoeP08226 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.96□□□□□ -0.34
ApoeP08226 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.96□□□□□ -0.34
ApoeP08226 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.96□□□□□ -0.34
ApoeP08226 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ApoeP08226 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ApoeP08226 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.95□□□□□ -0.34
ApoeP08226 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.95□□□□□ -0.34
ApoeP08226 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ApoeP08226 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Gm6443-201ENSMUST00000203599 874 ntBASIC12.95□□□□□ -0.34
ApoeP08226 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ApoeP08226 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.95□□□□□ -0.34
ApoeP08226 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ApoeP08226 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ApoeP08226 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ApoeP08226 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ApoeP08226 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.94□□□□□ -0.34
ApoeP08226 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ApoeP08226 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ApoeP08226 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.94□□□□□ -0.34
ApoeP08226 Gm2810-201ENSMUST00000118681 990 ntBASIC12.94□□□□□ -0.34
ApoeP08226 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.94□□□□□ -0.34
ApoeP08226 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.94□□□□□ -0.34
ApoeP08226 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 Gm44492-201ENSMUST00000197012 141 ntBASIC12.94□□□□□ -0.34
ApoeP08226 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.94□□□□□ -0.34
ApoeP08226 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.94□□□□□ -0.34
ApoeP08226 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ApoeP08226 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ApoeP08226 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
ApoeP08226 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms