Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.5□□□□□ -0.41
Col4a2P08122 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.5□□□□□ -0.41
Col4a2P08122 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.5□□□□□ -0.41
Col4a2P08122 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col4a2P08122 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.5□□□□□ -0.41
Col4a2P08122 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a2P08122 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.5□□□□□ -0.41
Col4a2P08122 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.49□□□□□ -0.41
Col4a2P08122 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col4a2P08122 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.49□□□□□ -0.41
Col4a2P08122 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col4a2P08122 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.49□□□□□ -0.41
Col4a2P08122 Rps4l-202ENSMUST00000204242 789 ntBASIC12.49□□□□□ -0.41
Col4a2P08122 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.49□□□□□ -0.41
Col4a2P08122 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col4a2P08122 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col4a2P08122 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.49□□□□□ -0.41
Col4a2P08122 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.49□□□□□ -0.41
Col4a2P08122 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.49□□□□□ -0.41
Col4a2P08122 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col4a2P08122 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.49□□□□□ -0.41
Col4a2P08122 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a2P08122 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.48□□□□□ -0.41
Col4a2P08122 Gm12176-201ENSMUST00000121420 875 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.48□□□□□ -0.41
Col4a2P08122 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.48□□□□□ -0.41
Col4a2P08122 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a2P08122 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a2P08122 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col4a2P08122 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a2P08122 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a2P08122 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col4a2P08122 Gm12997-201ENSMUST00000120207 640 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Gm18753-201ENSMUST00000201000 566 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Gm5363-201ENSMUST00000211927 938 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Mir433-201ENSMUST00000093564 124 ntBASIC12.48□□□□□ -0.41
Col4a2P08122 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a2P08122 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.47□□□□□ -0.41
Col4a2P08122 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms