Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
P04224 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
P04224 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.02□□□□□ -0.48
P04224 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.02□□□□□ -0.48
P04224 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P04224 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.02□□□□□ -0.49
P04224 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.02□□□□□ -0.49
P04224 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.02□□□□□ -0.49
P04224 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
P04224 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.02□□□□□ -0.49
P04224 Gm28659-201ENSMUST00000188013 759 ntBASIC12.02□□□□□ -0.49
P04224 Gm17971-201ENSMUST00000190239 806 ntBASIC12.02□□□□□ -0.49
P04224 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Gm2272-201ENSMUST00000194903 582 ntBASIC12.02□□□□□ -0.49
P04224 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.02□□□□□ -0.49
P04224 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.02□□□□□ -0.49
P04224 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.02□□□□□ -0.49
P04224 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.02□□□□□ -0.49
P04224 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P04224 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.02□□□□□ -0.49
P04224 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04224 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
P04224 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P04224 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
P04224 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
P04224 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Gm13884-201ENSMUST00000118103 829 ntBASIC12.01□□□□□ -0.49
P04224 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Gm16026-204ENSMUST00000162652 683 ntBASIC12.01□□□□□ -0.49
P04224 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.01□□□□□ -0.49
P04224 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.01□□□□□ -0.49
P04224 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.01□□□□□ -0.49
P04224 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.01□□□□□ -0.49
P04224 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.01□□□□□ -0.49
P04224 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P04224 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P04224 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms