Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.54□□□□□ -0.24
Pdlim1O70400 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.53□□□□□ -0.24
Pdlim1O70400 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Gm37917-201ENSMUST00000194711 392 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Gm17330-201ENSMUST00000221047 165 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Gm15823-201ENSMUST00000064305 670 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim1O70400 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Pdlim1O70400 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.53□□□□□ -0.24
Pdlim1O70400 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim1O70400 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.52□□□□□ -0.24
Pdlim1O70400 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.52□□□□□ -0.24
Pdlim1O70400 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim1O70400 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.52□□□□□ -0.25
Pdlim1O70400 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim1O70400 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.52□□□□□ -0.25
Pdlim1O70400 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pdlim1O70400 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.52□□□□□ -0.25
Pdlim1O70400 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pdlim1O70400 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.52□□□□□ -0.25
Pdlim1O70400 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim1O70400 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.51□□□□□ -0.25
Pdlim1O70400 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms