Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BckdkO55028 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BckdkO55028 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BckdkO55028 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BckdkO55028 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BckdkO55028 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
BckdkO55028 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.72□□□□□ -0.37
BckdkO55028 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.72□□□□□ -0.37
BckdkO55028 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.72□□□□□ -0.37
BckdkO55028 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Gm33320-201ENSMUST00000192232 530 ntBASIC12.72□□□□□ -0.37
BckdkO55028 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.72□□□□□ -0.37
BckdkO55028 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Gm6218-201ENSMUST00000219812 628 ntBASIC12.72□□□□□ -0.37
BckdkO55028 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BckdkO55028 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.72□□□□□ -0.37
BckdkO55028 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BckdkO55028 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.72□□□□□ -0.37
BckdkO55028 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BckdkO55028 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BckdkO55028 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.72□□□□□ -0.37
BckdkO55028 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BckdkO55028 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BckdkO55028 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
BckdkO55028 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Gm12585-201ENSMUST00000117307 290 ntBASIC12.71□□□□□ -0.37
BckdkO55028 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.71□□□□□ -0.37
BckdkO55028 Gm9522-201ENSMUST00000182394 926 ntBASIC12.71□□□□□ -0.37
BckdkO55028 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.71□□□□□ -0.37
BckdkO55028 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.71□□□□□ -0.37
BckdkO55028 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BckdkO55028 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
BckdkO55028 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.71□□□□□ -0.37
BckdkO55028 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.71□□□□□ -0.37
BckdkO55028 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
BckdkO55028 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
BckdkO55028 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
BckdkO55028 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
BckdkO55028 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.71□□□□□ -0.38
BckdkO55028 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
BckdkO55028 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BckdkO55028 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
BckdkO55028 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.7□□□□□ -0.38
BckdkO55028 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms