Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Gm6222-201ENSMUST00000120787 396 ntBASIC12.42□□□□□ -0.42
Rnf13O54965 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.42□□□□□ -0.42
Rnf13O54965 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf13O54965 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf13O54965 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf13O54965 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf13O54965 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.42□□□□□ -0.42
Rnf13O54965 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf13O54965 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.41□□□□□ -0.42
Rnf13O54965 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf13O54965 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.41□□□□□ -0.42
Rnf13O54965 Gm18027-201ENSMUST00000218947 619 ntBASIC12.41□□□□□ -0.42
Rnf13O54965 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf13O54965 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Rnf13O54965 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.41□□□□□ -0.42
Rnf13O54965 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf13O54965 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.41□□□□□ -0.42
Rnf13O54965 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf13O54965 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf13O54965 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf13O54965 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf13O54965 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf13O54965 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf13O54965 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Gm15467-201ENSMUST00000120582 445 ntBASIC12.4□□□□□ -0.42
Rnf13O54965 Rprl2-201ENSMUST00000157150 290 ntBASIC12.4□□□□□ -0.42
Rnf13O54965 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.4□□□□□ -0.42
Rnf13O54965 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf13O54965 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.4□□□□□ -0.42
Rnf13O54965 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf13O54965 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf13O54965 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf13O54965 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.4□□□□□ -0.42
Rnf13O54965 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf13O54965 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.4□□□□□ -0.43
Rnf13O54965 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.4□□□□□ -0.43
Rnf13O54965 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Rnf13O54965 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.4□□□□□ -0.43
Rnf13O54965 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf13O54965 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf13O54965 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf13O54965 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.39□□□□□ -0.43
Rnf13O54965 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf13O54965 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf13O54965 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms