Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.74□□□□□ -0.05
Nr1i3O35627 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nr1i3O35627 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.73□□□□□ -0.05
Nr1i3O35627 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.73□□□□□ -0.05
Nr1i3O35627 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.73□□□□□ -0.05
Nr1i3O35627 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nr1i3O35627 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.73□□□□□ -0.05
Nr1i3O35627 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.73□□□□□ -0.05
Nr1i3O35627 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.73□□□□□ -0.05
Nr1i3O35627 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1i3O35627 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nr1i3O35627 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1i3O35627 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.71□□□□□ -0.05
Nr1i3O35627 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nr1i3O35627 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.71□□□□□ -0.05
Nr1i3O35627 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.71□□□□□ -0.05
Nr1i3O35627 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Gm14767-201ENSMUST00000121559 586 ntBASIC14.71□□□□□ -0.05
Nr1i3O35627 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.71□□□□□ -0.05
Nr1i3O35627 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.71□□□□□ -0.05
Nr1i3O35627 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.71□□□□□ -0.05
Nr1i3O35627 Gm44344-201ENSMUST00000200287 129 ntBASIC14.71□□□□□ -0.05
Nr1i3O35627 Gm43703-201ENSMUST00000200523 763 ntBASIC14.71□□□□□ -0.05
Nr1i3O35627 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.71□□□□□ -0.05
Nr1i3O35627 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms