Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube3aO08759 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube3aO08759 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.81□□□□□ -0.04
Ube3aO08759 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ube3aO08759 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube3aO08759 Gm6222-201ENSMUST00000120787 396 ntBASIC14.81□□□□□ -0.04
Ube3aO08759 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.81□□□□□ -0.04
Ube3aO08759 Gm26308-201ENSMUST00000157768 69 ntBASIC14.81□□□□□ -0.04
Ube3aO08759 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Gm18027-201ENSMUST00000218947 619 ntBASIC14.81□□□□□ -0.04
Ube3aO08759 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube3aO08759 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube3aO08759 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube3aO08759 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.81□□□□□ -0.04
Ube3aO08759 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3aO08759 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ube3aO08759 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Ube3aO08759 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ube3aO08759 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.8□□□□□ -0.04
Ube3aO08759 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Ube3aO08759 Gm11025-201ENSMUST00000140773 466 ntBASIC14.8□□□□□ -0.04
Ube3aO08759 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Gm20553-201ENSMUST00000204205 844 ntBASIC14.8□□□□□ -0.04
Ube3aO08759 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.8□□□□□ -0.04
Ube3aO08759 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.8□□□□□ -0.04
Ube3aO08759 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ube3aO08759 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube3aO08759 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ube3aO08759 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3aO08759 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube3aO08759 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.79□□□□□ -0.04
Ube3aO08759 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.79□□□□□ -0.04
Ube3aO08759 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.79□□□□□ -0.04
Ube3aO08759 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube3aO08759 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.79□□□□□ -0.04
Ube3aO08759 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube3aO08759 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3aO08759 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms