Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Gm5466-201ENSMUST00000119395 1890 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Gm28182-201ENSMUST00000188354 2477 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Gm18827-201ENSMUST00000188341 790 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Gm21451-201ENSMUST00000111062 2775 ntBASIC20.38■□□□□ 0.85
Pcf11G3X9Z4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcf11G3X9Z4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Gm43134-201ENSMUST00000199434 1886 ntBASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Gm25214-201ENSMUST00000104573 129 ntBASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Gm15370-201ENSMUST00000117158 253 ntBASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Pcf11G3X9Z4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Gm11964-201ENSMUST00000120982 444 ntBASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcf11G3X9Z4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm4857-201ENSMUST00000192718 785 ntBASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm44772-201ENSMUST00000207623 1191 ntBASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm21769-201ENSMUST00000211922 111 ntBASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms