Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim55G3X8Y1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim55G3X8Y1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Gm44771-201ENSMUST00000206975 626 ntBASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim55G3X8Y1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms