Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb9E9Q5G2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Gm6244-201ENSMUST00000178732 841 ntBASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Gm5035-201ENSMUST00000215581 927 ntBASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb9E9Q5G2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms