Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Gm27920-201ENSMUST00000183953 96 ntBASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Gm12887B1AVM1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Gm27459-201ENSMUST00000184860 107 ntBASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.06□□□□□ -0.64
Gm12887B1AVM1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm12887B1AVM1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms