Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm13570-201ENSMUST00000140763 309 ntBASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Gm17208-201ENSMUST00000168388 535 ntBASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.8□□□□□ -0.2
Col4a6B1AVK5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Gm13875-201ENSMUST00000120162 282 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Gm13097-201ENSMUST00000210722 397 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Gm13461-201ENSMUST00000120980 662 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.79□□□□□ -0.2
Col4a6B1AVK5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.79□□□□□ -0.2
Col4a6B1AVK5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm14130-201ENSMUST00000118417 987 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm4909-201ENSMUST00000118749 794 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm22902-201ENSMUST00000158488 302 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gm7593-201ENSMUST00000187246 644 ntBASIC13.78□□□□□ -0.2
Col4a6B1AVK5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col4a6B1AVK5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col4a6B1AVK5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms