Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.15□□□□□ -0.46
Gm11127A7VMS2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.15□□□□□ -0.46
Gm11127A7VMS2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm11127A7VMS2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm11127A7VMS2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm6973-201ENSMUST00000117080 721 ntBASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm11543-201ENSMUST00000120758 370 ntBASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.13□□□□□ -0.47
Gm11127A7VMS2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms