Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn3aA2ASI5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gm19309-201ENSMUST00000218295 205 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn3aA2ASI5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm6023-201ENSMUST00000118217 606 ntBASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.1■□□□□ 0.01
Scn3aA2ASI5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.09■□□□□ 0.01
Scn3aA2ASI5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.09■□□□□ 0.01
Scn3aA2ASI5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms