Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm18460-201ENSMUST00000208088 464 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
Ubr4A2AN08 Gm13384-201ENSMUST00000117166 1344 ntBASIC7.02□□□□□ -1.28
Ubr4A2AN08 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC7.02□□□□□ -1.28
Ubr4A2AN08 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC7.02□□□□□ -1.28
Ubr4A2AN08 CT030637.1-201ENSMUST00000228016 669 ntBASIC7.02□□□□□ -1.28
Ubr4A2AN08 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Ubr4A2AN08 Mirlet7i-201ENSMUST00000083472 85 ntBASIC7.02□□□□□ -1.28
Ubr4A2AN08 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 AC158355.1-201ENSMUST00000215895 1705 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm16372-201ENSMUST00000073088 450 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Mir326-201ENSMUST00000083637 95 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Mir1956-201ENSMUST00000157748 65 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm5616-201ENSMUST00000165252 384 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm8741-201ENSMUST00000174736 384 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Mir7011-201ENSMUST00000183768 73 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm9004-201ENSMUST00000218739 1222 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 AC129017.2-201ENSMUST00000226118 1284 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm11637-201ENSMUST00000120601 592 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm5650-201ENSMUST00000209641 598 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm10580-201ENSMUST00000097985 396 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm10581-201ENSMUST00000097986 231 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm10582-201ENSMUST00000097987 396 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Gm10583-201ENSMUST00000097988 396 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 AC130671.2-201ENSMUST00000227224 1621 ntBASIC7.02□□□□□ -1.29
Ubr4A2AN08 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ubr4A2AN08 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC7.01□□□□□ -1.29
Ubr4A2AN08 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ubr4A2AN08 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms