Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm12485-201ENSMUST00000119641 291 ntBASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm17330-201ENSMUST00000221047 165 ntBASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm5161-201ENSMUST00000075243 853 ntBASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm7488-201ENSMUST00000117148 684 ntBASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atg4a-psA0A0G2JFS9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms