Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm44344-201ENSMUST00000200287 129 ntBASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm21470-201ENSMUST00000187680 696 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm5867-201ENSMUST00000063197 592 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Mir497b-201ENSMUST00000093601 125 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm37133-201ENSMUST00000192705 1922 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.97□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm15393-201ENSMUST00000120499 219 ntBASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm14767-201ENSMUST00000121559 586 ntBASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms