Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm45612-201ENSMUST00000211320 160 ntBASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav6n-6A0A075B6B2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Rpph1-201ENSMUST00000175096 319 ntBASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav6n-6A0A075B6B2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms