Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cx3cr1Q9Z0D9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm9812-201ENSMUST00000061934 968 ntBASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm4799-201ENSMUST00000095396 657 ntBASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cr1Q9Z0D9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cr1Q9Z0D9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cx3cr1Q9Z0D9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.22■□□□□ 0.51
Cx3cr1Q9Z0D9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cr1Q9Z0D9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.22■□□□□ 0.51
Cx3cr1Q9Z0D9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cx3cr1Q9Z0D9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cx3cr1Q9Z0D9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cx3cr1Q9Z0D9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cx3cr1Q9Z0D9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm6821-201ENSMUST00000107540 542 ntBASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cx3cr1Q9Z0D9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cx3cr1Q9Z0D9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cx3cr1Q9Z0D9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms