Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clca3a1Q9QX15 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.27■□□□□ 0.84
Clca3a1Q9QX15 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca3a1Q9QX15 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clca3a1Q9QX15 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clca3a1Q9QX15 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clca3a1Q9QX15 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clca3a1Q9QX15 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Clca3a1Q9QX15 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.26■□□□□ 0.83
Clca3a1Q9QX15 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Clca3a1Q9QX15 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.26■□□□□ 0.83
Clca3a1Q9QX15 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Gm22567-201ENSMUST00000175542 342 ntBASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clca3a1Q9QX15 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clca3a1Q9QX15 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clca3a1Q9QX15 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clca3a1Q9QX15 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.22■□□□□ 0.83
Clca3a1Q9QX15 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Clca3a1Q9QX15 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clca3a1Q9QX15 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clca3a1Q9QX15 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Clca3a1Q9QX15 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clca3a1Q9QX15 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clca3a1Q9QX15 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clca3a1Q9QX15 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clca3a1Q9QX15 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clca3a1Q9QX15 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clca3a1Q9QX15 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clca3a1Q9QX15 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca3a1Q9QX15 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clca3a1Q9QX15 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clca3a1Q9QX15 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clca3a1Q9QX15 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clca3a1Q9QX15 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Clca3a1Q9QX15 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Gm14523-201ENSMUST00000117260 558 ntBASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clca3a1Q9QX15 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clca3a1Q9QX15 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Clca3a1Q9QX15 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clca3a1Q9QX15 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clca3a1Q9QX15 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.16■□□□□ 0.82
Clca3a1Q9QX15 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Clca3a1Q9QX15 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca3a1Q9QX15 Gm27502-201ENSMUST00000183495 199 ntBASIC20.15■□□□□ 0.82
Clca3a1Q9QX15 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca3a1Q9QX15 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca3a1Q9QX15 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clca3a1Q9QX15 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.15■□□□□ 0.82
Clca3a1Q9QX15 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.14■□□□□ 0.81
Clca3a1Q9QX15 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms