Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.56■□□□□ 0.4
Crlf1Q9JM58 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf1Q9JM58 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Crlf1Q9JM58 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf1Q9JM58 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Crlf1Q9JM58 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf1Q9JM58 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Crlf1Q9JM58 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crlf1Q9JM58 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.52■□□□□ 0.4
Crlf1Q9JM58 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Crlf1Q9JM58 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crlf1Q9JM58 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crlf1Q9JM58 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Crlf1Q9JM58 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Crlf1Q9JM58 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Crlf1Q9JM58 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
Crlf1Q9JM58 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Crlf1Q9JM58 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Crlf1Q9JM58 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crlf1Q9JM58 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.5■□□□□ 0.39
Crlf1Q9JM58 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crlf1Q9JM58 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Crlf1Q9JM58 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.48■□□□□ 0.39
Crlf1Q9JM58 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crlf1Q9JM58 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Crlf1Q9JM58 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.48■□□□□ 0.39
Crlf1Q9JM58 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crlf1Q9JM58 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Crlf1Q9JM58 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf1Q9JM58 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf1Q9JM58 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crlf1Q9JM58 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Crlf1Q9JM58 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Crlf1Q9JM58 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crlf1Q9JM58 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crlf1Q9JM58 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Amer2-203ENSMUST00000225247 2662 ntBASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crlf1Q9JM58 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.43■□□□□ 0.38
Crlf1Q9JM58 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf1Q9JM58 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.43■□□□□ 0.38
Crlf1Q9JM58 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.43■□□□□ 0.38
Crlf1Q9JM58 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crlf1Q9JM58 Gm6139-201ENSMUST00000079261 882 ntBASIC17.43■□□□□ 0.38
Crlf1Q9JM58 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms